Plot distributions for feature intensities per sample.

Given a SummarizedExperiment, return a plot of the feature quantifications per sample.

Usage

plot_quant(
  obj,
  method = c("box", "density", "histogram"),
  log2transform = FALSE,
  facet_by_sample = FALSE
)

Arguments

obj

SummarizedExperiment.

method

string. Plot style. Choice of box, density or histogram plot.

log2transform

logical. Should feature quantifications be log-transformed?

facet_by_sample

logical. Facet the plot by sample.

Value

ggplot object.